A Coding Implementation for Creating, Annotating, and Visualizing Complex Biological Knowledge Graphs Using PyBEL
In this tutorial, we explore how to leverage the PyBEL ecosystem to construct and analyze rich biological knowledge graphs directly within Google Colab. We begin by installing all necessary packages, including PyBEL, NetworkX, Matplotlib, Seaborn, and Pandas. We then demonstrate how to define proteins, processes, and modifications using the PyBEL DSL. From there, we guide…
